Laboratory Medicine ›› 2020, Vol. 35 ›› Issue (10): 983-987.DOI: 10.3969/j.issn.1673-8640.2020.10.005

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Clinical application of RT-PCR for Klebsiella pneumoniae producing KPC carbapenemase

HE Lihua, NI Lijun, YANG Simin, YU Xiaoyu, ZHOU Aiping, HU Liang, GUO Jian, WU Wenjuan()   

  1. Department of Clinical Laboratory,Shanghai East Hospital,Tongji University,Shanghai 200123,China
  • Received:2019-06-10 Online:2020-10-30 Published:2020-11-12

Abstract:

Objective To evaluate the consistency of fluorescent quantitative real-time polymerase chain reaction(RT-PCR) and polymerase chain reaction(PCR) amplification for carbapenem-resistant Klebsiella pneumoniae(CRKP) producing KPC carbapenemase,and to evaluate the performance of RT-PCR for the direct determination of Klebsiella pneumoniae and blaKPC gene in clinical specimens. Methods Totally,89 clinical isolates of CRKP were collected. The determination rates and consistency of the 2 methods were compared. A total of 226 sputum specimens were collected. The blaKPC gene and blaphoE gene of outer membrane phospholipid protein of Klebsiella pneumoniae in clinical specimens were determined by RT-PCR. Traditional culture and drug susceptibility test were carried out to evaluate consistency. Results Among the 89 CRKP isolates,the determination rate of blaphoE gene was 100%,and 2 isolates did not determineblaKPC gene by RT-PCR and PCR amplification. The determination rate of blaKPC was 97.8%,and the consistency of the 2 methods was 100%. In the 226 sputum specimens,for the determination of blaphoE gene of Klebsiella pneumoniae by RT-PCR,using the results of culture as standard,the sensitivity,specificity and consistency of the 2 methods were 100%,99.38% and 99.56%,respectively. Using the results of drug susceptibility test as standard,for the determination of blaKPC gene of Klebsiella pneumoniae by RT-PCR,the sensitivity,specificity and consistency of the 2 methods were 95.56%,99.48% and 98.67%,respectively.Conclusions Klebsiella pneumoniae producing KPC carbapenemase can be rapidly screened by RT-PCR,which can provide a reference for rapid anti-infection treatment in patients with severe infection.

Key words: Klebsiella pneumoniae, Carbapenemase, blaKPC gene, Molecular determination

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