Laboratory Medicine ›› 2021, Vol. 36 ›› Issue (11): 1131-1134.DOI: 10.3969/j.issn.1673-8640.2021.11.008
Previous Articles Next Articles
WANG Yanyan, WANG Junrui, ZHENG Wenqi, SHEN Huimin, LÜ Yingying, GUO Sufang()
Received:
2020-10-29
Online:
2021-11-30
Published:
2021-12-20
Contact:
GUO Sufang
CLC Number:
WANG Yanyan, WANG Junrui, ZHENG Wenqi, SHEN Huimin, LÜ Yingying, GUO Sufang. Detection of Clostridium difficile toxin genes and diagnosis of multilocus sequence typing in patients with diarrhea in Hohhot[J]. Laboratory Medicine, 2021, 36(11): 1131-1134.
Add to citation manager EndNote|Ris|BibTeX
URL: https://www.shjyyx.com/EN/10.3969/j.issn.1673-8640.2021.11.008
引物名称 | 基因序列(5'→3') | 片段长度/bp |
---|---|---|
tcdA | F-AGATTCCTATATTTACATGACAATAT | 369 |
R-GTATCAGGCATAAAGTAATATACTTT | ||
tcdB | F-TGATGAAGATACAGCAGAAGC | 688 |
R-TGATTCTCCCTCAAAATTCTC | ||
cdtA | F-TGAACCTGGAAAAGGTGATG | 389 |
R-AGGATTATTTACTGGACCATTTG | ||
cdtB | F-CTTAATGCAAGTAAATACTGAG | 512 |
R-AACGGATCTCTTGCTTCAGTC | ||
adk | F-TTACTTGGACCTCCAGGTFF | 635 |
R-TTTCCACTTCCTAAGGCTGC | ||
atpA | F-TGATGATTTAAGTAAACAAGCTG | 674 |
R-AATCATGAGTGAAGTCTTCTCC | ||
dxr | F-GCTACTTTCCTTCTCTG | 525 |
R-CCAACTCTTTGTGCATAAA | ||
glyA | F-ATAGCTGATGAGGTTGGAGC | 625 |
R-TTCTAGCCTTAGATTCTTCATC | ||
recA | F-CAGTAATGAAATTGGGAGAAGC | 705 |
R-ATTCAGCTTGCTTAAATGGTG | ||
sodA | F-CCAGTTGTCAATGTATTCATTTC | 585 |
R-ATAACTTCATTTGCTTTTACACC | ||
tpi | F-ATGAGAAAACCTATAATTGCAG | 640 |
R-TTGAAGGTTTAACACTTCCACC |
引物名称 | 基因序列(5'→3') | 片段长度/bp |
---|---|---|
tcdA | F-AGATTCCTATATTTACATGACAATAT | 369 |
R-GTATCAGGCATAAAGTAATATACTTT | ||
tcdB | F-TGATGAAGATACAGCAGAAGC | 688 |
R-TGATTCTCCCTCAAAATTCTC | ||
cdtA | F-TGAACCTGGAAAAGGTGATG | 389 |
R-AGGATTATTTACTGGACCATTTG | ||
cdtB | F-CTTAATGCAAGTAAATACTGAG | 512 |
R-AACGGATCTCTTGCTTCAGTC | ||
adk | F-TTACTTGGACCTCCAGGTFF | 635 |
R-TTTCCACTTCCTAAGGCTGC | ||
atpA | F-TGATGATTTAAGTAAACAAGCTG | 674 |
R-AATCATGAGTGAAGTCTTCTCC | ||
dxr | F-GCTACTTTCCTTCTCTG | 525 |
R-CCAACTCTTTGTGCATAAA | ||
glyA | F-ATAGCTGATGAGGTTGGAGC | 625 |
R-TTCTAGCCTTAGATTCTTCATC | ||
recA | F-CAGTAATGAAATTGGGAGAAGC | 705 |
R-ATTCAGCTTGCTTAAATGGTG | ||
sodA | F-CCAGTTGTCAATGTATTCATTTC | 585 |
R-ATAACTTCATTTGCTTTTACACC | ||
tpi | F-ATGAGAAAACCTATAATTGCAG | 640 |
R-TTGAAGGTTTAACACTTCCACC |
MLST | ST型别 | Tcd基因 | 菌株数/株 |
---|---|---|---|
adk-atpA-dxr-glyA-recA-sodA-tpi | |||
1-4-7-1-1-3-3 | 54 | A+B+ | 8 |
1-1-6-6-1-12-12 | 55 | A+B+ | 5 |
1-1-2-1-5-3-1 | 2 | A+B+ | 5 |
1-1-2-1-1-1-1 | 3 | A+B+ | 3 |
1-1-2-1-1-7-1 | 42 | A-B+ | 1 |
1 | A+B+ | 2 | |
2-5-8-1-1-3-6 | 35 | A+B+ | 3 |
1-1-2-6-1-12-12 | 512 | A+B+ | 2 |
1-1-2-1-1-5-1 | 48 | A+B+ | 1 |
3-12-10-18-6-18-15 | 109 | A+B+ | 1 |
3-7-10-8-7-2-10 | 39 | A-B+ | 1 |
1-1-2-6-1-12-1 | 52 | A-B+ | 1 |
1-1-2-1-6-5-3 | 33 | A+B+ | 1 |
1-1-2-1-5-5-3 | 14 | A+B+ | 1 |
MLST | ST型别 | Tcd基因 | 菌株数/株 |
---|---|---|---|
adk-atpA-dxr-glyA-recA-sodA-tpi | |||
1-4-7-1-1-3-3 | 54 | A+B+ | 8 |
1-1-6-6-1-12-12 | 55 | A+B+ | 5 |
1-1-2-1-5-3-1 | 2 | A+B+ | 5 |
1-1-2-1-1-1-1 | 3 | A+B+ | 3 |
1-1-2-1-1-7-1 | 42 | A-B+ | 1 |
1 | A+B+ | 2 | |
2-5-8-1-1-3-6 | 35 | A+B+ | 3 |
1-1-2-6-1-12-12 | 512 | A+B+ | 2 |
1-1-2-1-1-5-1 | 48 | A+B+ | 1 |
3-12-10-18-6-18-15 | 109 | A+B+ | 1 |
3-7-10-8-7-2-10 | 39 | A-B+ | 1 |
1-1-2-6-1-12-1 | 52 | A-B+ | 1 |
1-1-2-1-6-5-3 | 33 | A+B+ | 1 |
1-1-2-1-5-5-3 | 14 | A+B+ | 1 |
[1] | 徐英春, 张曼. 中国成人艰难梭菌感染诊断和治疗专家共识[J]. 协和医学杂志, 2017, 8(2):131-138. |
[2] |
LEFFLER D A, LAMONT J T. Clostridium difficile infection[J]. N Engl J Med, 2015, 372(16):1539-1548.
DOI URL |
[3] |
RODRIGUEZ C, VAN BROECK J, TAMINIAU B, et al. Clostridium difficile infection:early history,diagnosis and molecular strain typing methods[J]. Microb Pathog, 2016, 97:59-78.
DOI URL |
[4] |
BAUER M P, NOTERMANS D W, VAN BENTHEM B H, et al. Clostridium difficile infection in Europe:a hospital-based survey[J]. Lancet, 2011, 377(9759):63-73.
DOI URL |
[5] | 徐少毅, 冯雪君, 陆晓凤, 等. 108例艰难梭菌相关性腹泻患者的临床诊治分析[J]. 中华医院感染学杂志, 2019, 29(11):1614-1618. |
[6] | 王丽志, 陈丽丹, 肖斌, 等. 3种艰难梭菌感染检测方法的比较[J]. 南方医科大学学报, 2017, 37(12) :1648-1653. |
[7] | 潘少敏, 黄东红, 谢若腾, 等. 多重聚合酶链反应方法检测艰难梭菌毒素基因研究[J]. 中华医院感染学杂志, 2015, 25(21):4808-4810. |
[8] |
CARTER G P, ROOD J I, LYRAS D. The role of toxin A and toxin B in the virulence of Clostridium difficile[J]. Trends Microbiol, 2012, 20(1):21-29.
DOI URL |
[9] | 房晴晴, 张晓霞, 王晓辉, 等. 四川大学华西医院2015—2017年艰难梭菌腹泻致病株药物敏感性及其变迁[J]. 四川大学学报(医学版), 2019, 50(1):123-127. |
[10] | 同俏静, 傅鹰, 史可人, 等. 艰难梭菌克隆分布及药物敏感性现状分析[J]. 中华医院感染学杂志, 2018, 28(18):2756-2760. |
[11] |
MCDONALD L C, KILLGORE G E, THOMPSON A, et al. An epidemic,toxin gene-variant strain of Clostridium difficile[J]. N Engl J Med, 2005, 353(23):2433-2441.
DOI URL |
[12] |
DUBBERKE E R, OLSEN M A. Burden of Clostridium difficile on the healthcare system[J]. Clin Infect Dis, 2012, 55(Suppl 2):S88-S92.
DOI URL |
[13] |
BAUER M P, NOTERMANS D W, VAN BENTHEM B H, et al. Clostridium difficile infection in Europe:a hospital-based survey[J]. Lancet, 2011, 377(9759):63-73.
DOI URL |
[14] |
GOORHUIS A, BAKKER D, CORVER J, et al. Emergence of Clostridium difficile infection due to a new hypervirulent strain,polymerase chain reaction ribotype 078[J]. Clin Infect Dis, 2008, 47(9):1162-1170.
DOI URL |
[15] | 黄海辉, 吴湜, 朱德妹, 等. 临床分离艰难梭菌188株的耐药性研究[J]. 中国感染与化疗杂志, 2011, 11(1):1-5. |
[16] |
CHENG V C, YAM W C, CHAN J F, et al. Clostridium difficile ribotype 027 arrives in Hong Kong[J]. Int J Antimicrob Agents, 2009, 34(5):492-493.
DOI URL |
[17] |
CHENG J W, XIAO M, KUDINHA T, et al. The first two Clostridium difficile ribotype 027/ST1 isolates identified in Beijing,China-an emerging problem or a neglected threat?[J]. Sci Rep, 2016, 6:18834.
DOI URL |
[18] | 张卉卉, 俞万钧, 马坚, 等. 社区获得性艰难梭菌感染相关因素分析[J]. 中华医院感染学杂志, 2018, 28(11):1621-1624. |
[19] |
ZHOU Y, MAO L, YU J, et al. Epidemiology of Clostridium difficile infection in hospitalized adults and the first isolation of C. difficile PCR ribotype 027 in central China[J]. BMC Infect Dis, 2019, 19(1):232.
DOI URL |
[20] |
YAN Q, ZHANG J, CHEN C, et al. Multilocus sequence typing(MLST) analysis of 104 Clostridium difficile strains isolated from China[J]. Epidemiol Infect, 2013, 141(1):195-199.
DOI URL |
[21] |
HAWKEY P M, MARRIOTT C, LIU W E, et al. Molecular epidemiology of Clostridium difficile infection in a major Chinese hospital:an underrecognized problem in Asia?[J]. J Clin Microbiol, 2013, 51(10):3308-3313.
DOI URL |
[22] |
QIN J, DAI Y, MA X, et al. Nosocomial transmission of Clostridium difficile genotype ST81 in a general teaching hospital in China traced by whole genome sequencing[J]. Sci Rep, 2017, 7(1):9627.
DOI URL |
[23] | YANG Z, HUANG Q, QIN J, et al. Molecular epidemiology and risk factors of Clostridium difficile ST81 infection in a teaching hospital in Eastern China[J]. Front Cellul Infect Microbiol, 2020, 10:578098. |
[1] | WANG Jiawei, ZHU Weinan, CHEN Yingying, JI Ping, WANG Ying. Clinical characteristics,molecular typing and drug resistance genes of carbapenem-resistant Klebsiella pneumoniae isolated from blood culturing [J]. Laboratory Medicine, 2023, 38(4): 362-367. |
[2] | MA Kaihui, LÜ Zhi, ZHOU Yanyan, SU Jianrong. Characteristic analysis of Clostridium difficile colonization and infection in inpatients [J]. Laboratory Medicine, 2023, 38(2): 153-156. |
[3] | CHEN Qing, XU Rong, SUN Jingyong. Resistance mechanisms and molecular epidemiology of Pseudomonas aeruginosa from patients with bronchiectasis in Shanghai [J]. Laboratory Medicine, 2023, 38(11): 1020-1025. |
[4] | DENG Chen, DAI Jiaze, QIU Lihong, SHEN Weiting, CAI Mufa, LUO Wenying. Molecular epidemic characteristics of hypervirulent Klebsiella pneumoniae in Zhanjiang [J]. Laboratory Medicine, 2023, 38(11): 1026-1031. |
[5] | SUN Wei, XIA Shuai, FAN Yujian, MA Liyan. Drug resistance and biofilm formation abilities of Corynebacterium striatum with different genotypes [J]. Laboratory Medicine, 2022, 37(6): 505-509. |
[6] | WANG Jingjing, WU Linqing, CHEN Rushou, WANG Yufeng. Drug resistance genotype,transposon structure and MLSA of vancomycin-resistant Enterococcus [J]. Laboratory Medicine, 2021, 36(9): 891-895. |
[7] | SHAO Donghua, SONG Yan, LIANG Guowei. Analysis on drug resistance and toxin gene carrying status of Clostridium difficile clinical isolates in a hospital of Beijing [J]. Laboratory Medicine, 2020, 35(9): 864-867. |
[8] | WU Siying, WANG Xiaoqing, LIU Shanquan, XIAO Yuling, HE Chao, MA Ying, XIE Yi, KANG Mei. Identification of vancomycin-resistant Enterococcus faecium by MALDI-TOF MS and epidemiological typing performance [J]. Laboratory Medicine, 2020, 35(5): 470-475. |
[9] | HUANG Yingfeng, LIN Xuefei, HUANG Huanhuan, WU Aiwu. Prokaryotic expression and immunogenicity analysis of Clostridium difficile binary toxin A [J]. Laboratory Medicine, 2020, 35(2): 159-163. |
[10] | WEN Weihong, LIANG Yingjian, MA Furong, LI Yuzhen, XU Lingqing. Carbapenemase detection and multilocus sequence typing analysis of carbapenem-resistant Enterobacteriaceae [J]. Laboratory Medicine, 2019, 34(7): 577-582. |
[11] | ZHOU Shan, LIU Jiayun, MA Yueyun, ZHOU Ke, ZHOU Lei, HAO Xiaoke, XU Xiuli. Drug resistance and molecular epidemiology of Staphylococcus aureus with suppurative infection [J]. Laboratory Medicine, 2019, 34(2): 140-143. |
[12] | YU Jiajia, LIU Jingxian, LI Yuanrui, YU Jing, LIU Ying. Rapid detection of KPC-2 producing Klebsiella pneumoniae ST11 by matrix-assisted laser desorption ionization time-of-flight mass spectrometry [J]. Laboratory Medicine, 2018, 33(6): 536-542. |
[13] | XU Weixin, SUN Jie. Multilocus sequence typing in the molecular epidemiological study of azole-resistant Candida albicans from patients with Candida albicans vaginitis [J]. Laboratory Medicine, 2018, 33(3): 233-238. |
[14] | QIN Juanxiu, ZHANG Haomin, LIU Qian, XIA Qiang, LI Min. Performance of C. DIFF QUICK CHEK COMPLETE [J]. Laboratory Medicine, 2017, 32(12): 1152-1155. |
[15] | PAN Jun, XU Qingxia, XIAO Weiqiang, CHANG Yanmin, SHEN Yong. Multilocus sequence typing study of ESBLs-producing Escherichia coli in one hospital [J]. Laboratory Medicine, 2015, 30(9): 939-943. |
Viewed | ||||||
Full text |
|
|||||
Abstract |
|
|||||